J5_6FXC_016
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- ACAUGCAAG*CGGACGGG*CAC*GAC*GGCAGCAGU
- Length
- 32 nucleotides
- Bulged bases
- 6FXC|1|Ba|A|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FXC|1|Ba|A|54
6FXC|1|Ba|C|55
6FXC|1|Ba|A|56
6FXC|1|Ba|U|57
6FXC|1|Ba|G|58
6FXC|1|Ba|C|59
6FXC|1|Ba|A|60
6FXC|1|Ba|A|61
6FXC|1|Ba|G|62
*
6FXC|1|Ba|C|105
6FXC|1|Ba|G|106
6FXC|1|Ba|G|107
6FXC|1|Ba|A|108
6FXC|1|Ba|C|109
6FXC|1|Ba|G|110
6FXC|1|Ba|G|111
6FXC|1|Ba|G|112
*
6FXC|1|Ba|C|322
6FXC|1|Ba|A|323
6FXC|1|Ba|C|324
*
6FXC|1|Ba|G|345
6FXC|1|Ba|A|346
6FXC|1|Ba|C|347
*
6FXC|1|Ba|G|358
6FXC|1|Ba|G|359
6FXC|1|Ba|C|360
6FXC|1|Ba|A|361
6FXC|1|Ba|G|362
6FXC|1|Ba|C|363
6FXC|1|Ba|A|364
6FXC|1|Ba|G|365
6FXC|1|Ba|U|366
Current chains
- Chain Ba
- 16S ribosomal RNA
Nearby chains
- Chain BI
- 50S ribosomal protein L14
- Chain BN
- 50S ribosomal protein L19
- Chain Bl
- 30S ribosomal protein S12
- Chain Bp
- 30S ribosomal protein S16
- Chain Bt
- 30S ribosomal protein S20
Coloring options: