J5_6GZ4_002
3D structure
- PDB id
- 6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAGUC*GGAC*GUUC*GCC*GCAGAUC
- Length
- 24 nucleotides
- Bulged bases
- 6GZ4|1|A2|C|2268, 6GZ4|1|A2|U|2329
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZ4|1|A2|G|1318
6GZ4|1|A2|G|1319
6GZ4|1|A2|A|1320
6GZ4|1|A2|G|1321
6GZ4|1|A2|U|1322
6GZ4|1|A2|C|1323
*
6GZ4|1|A2|G|1498
6GZ4|1|A2|G|1499
6GZ4|1|A2|A|1500
6GZ4|1|A2|C|1501
*
6GZ4|1|A2|G|1640
6GZ4|1|A2|U|1641
6GZ4|1|A2|U|1642
6GZ4|1|A2|C|1643
*
6GZ4|1|A2|G|2267
6GZ4|1|A2|C|2268
6GZ4|1|A2|C|2269
*
6GZ4|1|A2|G|2324
6GZ4|1|A2|C|2325
6GZ4|1|A2|A|2326
6GZ4|1|A2|G|2327
6GZ4|1|A2|A|2328
6GZ4|1|A2|U|2329
6GZ4|1|A2|C|2330
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AC
- ribosomal protein uL4
- Chain AL
- ribosomal protein eL13
- Chain AN
- ribosomal protein eL15
- Chain Aa
- ribosomal protein uL15
- Chain Ae
- ribosomal protein eL32
- Chain At
- ribosomal protein eL28
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