J5_6GZX_001
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- CGAUGAAG*CGAAUGGG*CCCG*CACCGC*GCGGGG
- Length
- 32 nucleotides
- Bulged bases
- 6GZX|1|A1|U|49
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZX|1|A1|C|46
6GZX|1|A1|G|47
6GZX|1|A1|A|48
6GZX|1|A1|U|49
6GZX|1|A1|G|50
6GZX|1|A1|A|51
6GZX|1|A1|A|52
6GZX|1|A1|G|53
*
6GZX|1|A1|C|114
6GZX|1|A1|G|115
6GZX|1|A1|A|116
6GZX|1|A1|A|117
6GZX|1|A1|U|118
6GZX|1|A1|G|119
6GZX|1|A1|G|120
6GZX|1|A1|G|121
*
6GZX|1|A1|C|126
6GZX|1|A1|C|127
6GZX|1|A1|C|128
6GZX|1|A1|G|129
*
6GZX|1|A1|C|148
6GZX|1|A1|A|149
6GZX|1|A1|C|150
6GZX|1|A1|C|151
6GZX|1|A1|G|152
6GZX|1|A1|C|153
*
6GZX|1|A1|G|163
6GZX|1|A1|C|164
6GZX|1|A1|G|165
6GZX|1|A1|G|166
6GZX|1|A1|G|167
6GZX|1|A1|G|168
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain S1
- 50S ribosomal protein L23
- Chain W1
- 50S ribosomal protein L28
- Chain c1
- 50S ribosomal protein L34
Coloring options: