J5_6GZX_018
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- CAG*CGUGCCUAUUGAAGCAUGAG*CAUGAGUAACGAUAAAGAGGGUGAGAAUCCCUCUCGC*GCGCGC*GGUGAAAUUG
- Length
- 76 nucleotides
- Bulged bases
- 6GZX|1|A2|A|559, 6GZX|1|A2|C|599, 6GZX|1|A2|G|1319, 6GZX|1|A2|U|1321
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZX|1|A2|C|558
6GZX|1|A2|A|559
6GZX|1|A2|G|560
*
6GZX|1|A2|C|585
6GZX|1|A2|G|586
6GZX|1|A2|U|587
6GZX|1|A2|G|588
6GZX|1|A2|C|589
6GZX|1|A2|C|590
6GZX|1|A2|U|591
6GZX|1|A2|A|592
6GZX|1|A2|U|593
6GZX|1|A2|U|594
6GZX|1|A2|G|595
6GZX|1|A2|A|596
6GZX|1|A2|A|597
6GZX|1|A2|G|598
6GZX|1|A2|C|599
6GZX|1|A2|A|600
6GZX|1|A2|U|601
6GZX|1|A2|G|602
6GZX|1|A2|A|603
6GZX|1|A2|G|604
*
6GZX|1|A2|C|1309
6GZX|1|A2|A|1310
6GZX|1|A2|U|1311
6GZX|1|A2|G|1312
6GZX|1|A2|A|1313
6GZX|1|A2|G|1314
6GZX|1|A2|U|1315
6GZX|1|A2|A|1316
6GZX|1|A2|A|1317
6GZX|1|A2|C|1318
6GZX|1|A2|G|1319
6GZX|1|A2|A|1320
6GZX|1|A2|U|1321
6GZX|1|A2|A|1322
6GZX|1|A2|A|1323
6GZX|1|A2|A|1324
6GZX|1|A2|G|1325
6GZX|1|A2|A|1326
6GZX|1|A2|G|1327
6GZX|1|A2|G|1328
6GZX|1|A2|G|1329
6GZX|1|A2|U|1330
6GZX|1|A2|G|1331
6GZX|1|A2|A|1332
6GZX|1|A2|G|1333
6GZX|1|A2|A|1334
6GZX|1|A2|A|1335
6GZX|1|A2|U|1336
6GZX|1|A2|C|1337
6GZX|1|A2|C|1338
6GZX|1|A2|C|1339
6GZX|1|A2|U|1340
6GZX|1|A2|C|1341
6GZX|1|A2|U|1342
6GZX|1|A2|C|1343
6GZX|1|A2|G|1344
6GZX|1|A2|C|1345
*
6GZX|1|A2|G|1692
6GZX|1|A2|C|1693
6GZX|1|A2|G|1694
6GZX|1|A2|C|1695
6GZX|1|A2|G|1696
6GZX|1|A2|C|1697
*
6GZX|1|A2|G|2033
6GZX|1|A2|G|2034
6GZX|1|A2|U|2035
6GZX|1|A2|G|2036
6GZX|1|A2|A|2037
6GZX|1|A2|A|2038
6GZX|1|A2|A|2039
6GZX|1|A2|U|2040
6GZX|1|A2|U|2041
6GZX|1|A2|G|2042
Current chains
- Chain A2
- 23S ribosomal RNA
Nearby chains
- Chain D2
- 50S ribosomal protein L3
- Chain E2
- 50S ribosomal protein L4
- Chain K2
- 50S ribosomal protein L15
- Chain M2
- 50S ribosomal protein L17
- Chain P2
- 50S ribosomal protein L20
- Chain Q2
- 50S ribosomal protein L21
- Chain R2
- 50S ribosomal protein L22
- Chain a2
- 50S ribosomal protein L32
Coloring options: