J5_6H58_011
3D structure
- PDB id
- 6H58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 6H58|1|AA|A|2448, 6H58|1|AA|G|2505, 6H58|1|AA|U|2585, 6H58|1|AA|U|2609, 6H58|1|AA|C|2610
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6H58|1|AA|G|2057
6H58|1|AA|A|2058
6H58|1|AA|A|2059
6H58|1|AA|A|2060
6H58|1|AA|G|2061
6H58|1|AA|A|2062
6H58|1|AA|C|2063
6H58|1|AA|C|2064
*
6H58|1|AA|G|2446
6H58|1|AA|G|2447
6H58|1|AA|A|2448
6H58|1|AA|U|2449
6H58|1|AA|A|2450
6H58|1|AA|A|2451
6H58|1|AA|C|2452
6H58|1|AA|A|2453
*
6H58|1|AA|U|2500
6H58|1|AA|C|2501
6H58|1|AA|G|2502
6H58|1|AA|A|2503
6H58|1|AA|U|2504
6H58|1|AA|G|2505
6H58|1|AA|U|2506
6H58|1|AA|C|2507
*
6H58|1|AA|G|2582
6H58|1|AA|G|2583
6H58|1|AA|U|2584
6H58|1|AA|U|2585
6H58|1|AA|U|2586
6H58|1|AA|A|2587
6H58|1|AA|G|2588
*
6H58|1|AA|C|2606
6H58|1|AA|G|2607
6H58|1|AA|G|2608
6H58|1|AA|U|2609
6H58|1|AA|C|2610
6H58|1|AA|C|2611
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain 00
- 50S ribosomal protein L32
- Chain CC
- 50S ribosomal protein L2
- Chain DD
- 50S ribosomal protein L3
- Chain EE
- 50S ribosomal protein L4
- Chain LL
- 50S ribosomal protein L15
- Chain MM
- 50S ribosomal protein L16
- Chain SS
- 50S ribosomal protein L22
Coloring options: