J5_6HA1_006
3D structure
- PDB id
- 6HA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 6HA1|1|A|A|2477, 6HA1|1|A|U|2478, 6HA1|1|A|U|2638
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HA1|1|A|G|2086
6HA1|1|A|A|2087
6HA1|1|A|A|2088
6HA1|1|A|A|2089
6HA1|1|A|G|2090
6HA1|1|A|A|2091
6HA1|1|A|C|2092
6HA1|1|A|C|2093
*
6HA1|1|A|G|2475
6HA1|1|A|G|2476
6HA1|1|A|A|2477
6HA1|1|A|U|2478
6HA1|1|A|A|2479
6HA1|1|A|A|2480
6HA1|1|A|C|2481
6HA1|1|A|A|2482
*
6HA1|1|A|U|2529
6HA1|1|A|C|2530
6HA1|1|A|G|2531
6HA1|1|A|A|2532
6HA1|1|A|U|2533
6HA1|1|A|G|2534
6HA1|1|A|U|2535
6HA1|1|A|C|2536
*
6HA1|1|A|G|2611
6HA1|1|A|G|2612
6HA1|1|A|U|2613
6HA1|1|A|U|2614
6HA1|1|A|C|2615
6HA1|1|A|A|2616
6HA1|1|A|G|2617
*
6HA1|1|A|C|2635
6HA1|1|A|G|2636
6HA1|1|A|G|2637
6HA1|1|A|U|2638
6HA1|1|A|C|2639
6HA1|1|A|C|2640
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain C
- 50S ribosomal protein L2
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain M
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L22
- Chain W
- 50S ribosomal protein L27
- Chain x
- Transfer RNA; tRNA
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