J5_6HRM_001
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- CUGG*CGUG*CUUUCAGCGGGGAGG*CGUUACCCGCAGAAGAAG*CAAG
- Length
- 45 nucleotides
- Bulged bases
- 6HRM|1|1|U|485
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HRM|1|1|C|36
6HRM|1|1|U|37
6HRM|1|1|G|38
6HRM|1|1|G|39
*
6HRM|1|1|C|403
6HRM|1|1|G|404
6HRM|1|1|U|405
6HRM|1|1|G|406
*
6HRM|1|1|C|436
6HRM|1|1|U|437
6HRM|1|1|U|438
6HRM|1|1|U|439
6HRM|1|1|C|440
6HRM|1|1|A|441
6HRM|1|1|G|442
6HRM|1|1|C|443
6HRM|1|1|G|444
6HRM|1|1|G|445
6HRM|1|1|G|446
6HRM|1|1|G|447
6HRM|1|1|A|448
6HRM|1|1|G|449
6HRM|1|1|G|450
*
6HRM|1|1|C|483
6HRM|1|1|G|484
6HRM|1|1|U|485
6HRM|1|1|U|486
6HRM|1|1|A|487
6HRM|1|1|C|488
6HRM|1|1|C|489
6HRM|1|1|C|490
6HRM|1|1|G|491
6HRM|1|1|C|492
6HRM|1|1|A|493
6HRM|1|1|G|494
6HRM|1|1|A|495
6HRM|1|1|A|496
6HRM|1|1|G|497
6HRM|1|1|A|498
6HRM|1|1|A|499
6HRM|1|1|G|500
*
6HRM|1|1|C|545
6HRM|1|1|A|546
6HRM|1|1|A|547
6HRM|1|1|G|548
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S4
- Chain q
- 30S ribosomal protein S12
- Chain u
- 30S ribosomal protein S16
Coloring options: