J5_6HTQ_005
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GCAAAAUGA*UG*CC*GUGAAUAGGCC*GGCAC
- Length
- 29 nucleotides
- Bulged bases
- 6HTQ|1|A|G|1787, 6HTQ|1|A|G|1792
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HTQ|1|A|G|1719
6HTQ|1|A|C|1720
6HTQ|1|A|A|1721
6HTQ|1|A|A|1722
6HTQ|1|A|A|1723
6HTQ|1|A|A|1724
6HTQ|1|A|U|1725
6HTQ|1|A|G|1726
6HTQ|1|A|A|1727
*
6HTQ|1|A|U|1751
6HTQ|1|A|G|1752
*
6HTQ|1|A|C|1780
6HTQ|1|A|C|1781
*
6HTQ|1|A|G|1785
6HTQ|1|A|U|1786
6HTQ|1|A|G|1787
6HTQ|1|A|A|1788
6HTQ|1|A|A|1789
6HTQ|1|A|U|1790
6HTQ|1|A|A|1791
6HTQ|1|A|G|1792
6HTQ|1|A|G|1793
6HTQ|1|A|C|1794
6HTQ|1|A|C|1795
*
6HTQ|1|A|G|2015
6HTQ|1|A|G|2016
6HTQ|1|A|C|2017
6HTQ|1|A|A|2018
6HTQ|1|A|C|2019
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L14
- Chain P
- 50S ribosomal protein L19
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: