J5_6O90_002

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CCAAAC*GGGUUGUA*UGAGUAC*GGAAUCCG*CAAG

Length

33 nucleotides

Bulged bases

6O90|1|A|U|301, 6O90|1|A|C|445

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O90|1|A|C|271
6O90|1|A|C|272
6O90|1|A|A|273
6O90|1|A|A|274
6O90|1|A|A|275
6O90|1|A|C|276
*
6O90|1|A|G|295
6O90|1|A|G|296
6O90|1|A|G|297
6O90|1|A|U|298
6O90|1|A|U|299
6O90|1|A|G|300
6O90|1|A|U|301
6O90|1|A|A|302
*
6O90|1|A|U|409
6O90|1|A|G|410
6O90|1|A|A|411
6O90|1|A|G|412
6O90|1|A|U|413
6O90|1|A|A|414
6O90|1|A|C|415
*
6O90|1|A|G|439
6O90|1|A|G|440
6O90|1|A|A|441
6O90|1|A|A|442
6O90|1|A|U|443
6O90|1|A|C|444
6O90|1|A|C|445
6O90|1|A|G|446
*
6O90|1|A|C|461
6O90|1|A|A|462
6O90|1|A|A|463
6O90|1|A|G|464

Current chains

Chain A

23S rRNA

Nearby chains

Chain Y

50S ribosomal protein L28