J5_6O90_008

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CUGG*CGUG*CUGUUG*CCAGAAAG*CAAG

Length

26 nucleotides

Bulged bases

6O90|1|a|A|561

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O90|1|a|C|33
6O90|1|a|U|34
6O90|1|a|G|35
6O90|1|a|G|36
*
6O90|1|a|C|418
6O90|1|a|G|419
6O90|1|a|U|420
6O90|1|a|G|421
*
6O90|1|a|C|451
6O90|1|a|U|452
6O90|1|a|G|453
6O90|1|a|U|454
6O90|1|a|U|455
6O90|1|a|G|456
*
6O90|1|a|C|508
6O90|1|a|C|509
6O90|1|a|A|510
6O90|1|a|G|511
6O90|1|a|A|512
6O90|1|a|A|513
6O90|1|a|A|514
6O90|1|a|G|515
*
6O90|1|a|C|560
6O90|1|a|A|561
6O90|1|a|A|562
6O90|1|a|G|563

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain l

30S ribosomal protein S12