J5_6OGI_009
3D structure
- PDB id
- 6OGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAUGCAAGU*GCGGACGGG*CAC*GAC*GGCAGCAG
- Length
- 32 nucleotides
- Bulged bases
- 6OGI|1|3|A|109
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OGI|1|3|C|54
6OGI|1|3|A|55
6OGI|1|3|U|56
6OGI|1|3|G|57
6OGI|1|3|C|58
6OGI|1|3|A|59
6OGI|1|3|A|60
6OGI|1|3|G|61
6OGI|1|3|U|62
*
6OGI|1|3|G|105
6OGI|1|3|C|106
6OGI|1|3|G|107
6OGI|1|3|G|108
6OGI|1|3|A|109
6OGI|1|3|C|110
6OGI|1|3|G|111
6OGI|1|3|G|112
6OGI|1|3|G|113
*
6OGI|1|3|C|314
6OGI|1|3|A|315
6OGI|1|3|C|316
*
6OGI|1|3|G|337
6OGI|1|3|A|338
6OGI|1|3|C|339
*
6OGI|1|3|G|350
6OGI|1|3|G|351
6OGI|1|3|C|352
6OGI|1|3|A|353
6OGI|1|3|G|354
6OGI|1|3|C|355
6OGI|1|3|A|356
6OGI|1|3|G|357
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain U
- 30S ribosomal protein S16
- Chain Y
- 30S ribosomal protein S20
- Chain k
- 50S ribosomal protein L14
- Chain p
- 50S ribosomal protein L19
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