J5_6OLF_005
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- ACC*GAGGGAGCGAGACCCGUCGCCGCGCUCUC*GCCGGGC*GCCACGCGCGCGU*GACGGCGGAGAGCGCACGGGGU
- Length
- 74 nucleotides
- Bulged bases
- 6OLF|1|t|G|945, 6OLF|1|t|G|946, 6OLF|1|t|C|949, 6OLF|1|t|G|952, 6OLF|1|t|C|954, 6OLF|1|t|U|958, 6OLF|1|t|C|1220, 6OLF|1|t|G|1225, 6OLF|1|t|C|1226, 6OLF|1|t|G|1227, 6OLF|1|t|G|1248, 6OLF|1|t|G|1264
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLF|1|t|A|702
6OLF|1|t|C|703
6OLF|1|t|C|704
*
6OLF|1|t|G|942
6OLF|1|t|A|943
6OLF|1|t|G|944
6OLF|1|t|G|945
6OLF|1|t|G|946
6OLF|1|t|A|947
6OLF|1|t|G|948
6OLF|1|t|C|949
6OLF|1|t|G|950
6OLF|1|t|A|951
6OLF|1|t|G|952
6OLF|1|t|A|953
6OLF|1|t|C|954
6OLF|1|t|C|955
6OLF|1|t|C|956
6OLF|1|t|G|957
6OLF|1|t|U|958
6OLF|1|t|C|959
6OLF|1|t|G|960
6OLF|1|t|C|961
6OLF|1|t|C|962
6OLF|1|t|G|963
6OLF|1|t|C|964
6OLF|1|t|G|965
6OLF|1|t|C|966
6OLF|1|t|U|967
6OLF|1|t|C|968
6OLF|1|t|U|969
6OLF|1|t|C|970
*
6OLF|1|t|G|1053
6OLF|1|t|C|1054
6OLF|1|t|C|1055
6OLF|1|t|G|1056
6OLF|1|t|G|1057
6OLF|1|t|G|1058
6OLF|1|t|C|1059
*
6OLF|1|t|G|1218
6OLF|1|t|C|1219
6OLF|1|t|C|1220
6OLF|1|t|A|1221
6OLF|1|t|C|1222
6OLF|1|t|G|1223
6OLF|1|t|C|1224
6OLF|1|t|G|1225
6OLF|1|t|C|1226
6OLF|1|t|G|1227
6OLF|1|t|C|1228
6OLF|1|t|G|1229
6OLF|1|t|U|1230
*
6OLF|1|t|G|1245
6OLF|1|t|A|1246
6OLF|1|t|C|1247
6OLF|1|t|G|1248
6OLF|1|t|G|1249
6OLF|1|t|C|1250
6OLF|1|t|G|1251
6OLF|1|t|G|1252
6OLF|1|t|A|1253
6OLF|1|t|G|1256
6OLF|1|t|A|1257
6OLF|1|t|G|1258
6OLF|1|t|C|1259
6OLF|1|t|G|1260
6OLF|1|t|C|1261
6OLF|1|t|A|1262
6OLF|1|t|C|1263
6OLF|1|t|G|1264
6OLF|1|t|G|1265
6OLF|1|t|G|1266
6OLF|1|t|G|1267
6OLF|1|t|U|1268
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain G
- 60S ribosomal protein L6
- Chain H
- 60S ribosomal protein L7
- Chain c
- 60S ribosomal protein L29
- Chain f
- 60S ribosomal protein L32
- Chain g
- 60S ribosomal protein L35a
Coloring options: