J5_6OM7_002
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUA(OMG)
- Length
- 35 nucleotides
- Bulged bases
- 6OM7|1|S2|A|560, 6OM7|1|S2|G|588, 6OM7|1|S2|G|589
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OM7|1|S2|C|30
6OM7|1|S2|U|31
6OM7|1|S2|U|32
6OM7|1|S2|G|33
6OM7|1|S2|U|34
*
6OM7|1|S2|A|521
6OM7|1|S2|A|522
6OM7|1|S2|A|523
6OM7|1|S2|U|524
6OM7|1|S2|A|525
6OM7|1|S2|A|526
6OM7|1|S2|C|527
*
6OM7|1|S2|G|558
6OM7|1|S2|G|559
6OM7|1|S2|A|560
6OM7|1|S2|A|561
6OM7|1|S2|U|562
6OM7|1|S2|G|563
6OM7|1|S2|A|564
6OM7|1|S2|G|565
*
6OM7|1|S2|C|585
6OM7|1|S2|G|586
6OM7|1|S2|A|587
6OM7|1|S2|G|588
6OM7|1|S2|G|589
6OM7|1|S2|A|590
6OM7|1|S2|U|591
6OM7|1|S2|C|592
6OM7|1|S2|C|593
6OM7|1|S2|A|594
6OM7|1|S2|U|595
*
6OM7|1|S2|A|641
6OM7|1|S2|U|642
6OM7|1|S2|A|643
6OM7|1|S2|OMG|644
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SJ
- 40S ribosomal protein S9
- Chain SX
- 40S ribosomal protein S23
- Chain Se
- 40S ribosomal protein S30
Coloring options: