J5_6QNR_018
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCG(2MA)UGUC*GGUUCAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 6QNR|1|1H|A|2085, 6QNR|1|1H|A|2461, 6QNR|1|1H|U|2462, 6QNR|1|1H|U|2598, 6QNR|1|1H|U|2622
- QA status
- Modified nucleotides: 2MA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QNR|1|1H|A|2080
6QNR|1|1H|A|2081
6QNR|1|1H|A|2082
6QNR|1|1H|A|2083
6QNR|1|1H|G|2084
6QNR|1|1H|A|2085
6QNR|1|1H|C|2086
6QNR|1|1H|C|2087
*
6QNR|1|1H|G|2459
6QNR|1|1H|G|2460
6QNR|1|1H|A|2461
6QNR|1|1H|U|2462
6QNR|1|1H|A|2463
6QNR|1|1H|A|2464
6QNR|1|1H|C|2465
6QNR|1|1H|A|2466
*
6QNR|1|1H|U|2513
6QNR|1|1H|C|2514
6QNR|1|1H|G|2515
6QNR|1|1H|2MA|2516
6QNR|1|1H|U|2517
6QNR|1|1H|G|2518
6QNR|1|1H|U|2519
6QNR|1|1H|C|2520
*
6QNR|1|1H|G|2595
6QNR|1|1H|G|2596
6QNR|1|1H|U|2597
6QNR|1|1H|U|2598
6QNR|1|1H|C|2599
6QNR|1|1H|A|2600
6QNR|1|1H|G|2601
*
6QNR|1|1H|C|2619
6QNR|1|1H|G|2620
6QNR|1|1H|G|2621
6QNR|1|1H|U|2622
6QNR|1|1H|C|2623
6QNR|1|1H|U|2624
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 11
- 50S ribosomal protein L2
- Chain 1K
- Transfer RNA; tRNA
- Chain 21
- 50S ribosomal protein L3
- Chain 2K
- Transfer RNA; tRNA
- Chain 31
- 50S ribosomal protein L4
- Chain 78
- 50S ribosomal protein L15
- Chain 88
- 50S ribosomal protein L16
- Chain E8
- 50S ribosomal protein L22
- Chain I8
- 50S ribosomal protein L27
- Chain N8
- 50S ribosomal protein L32
Coloring options: