J5_6S0X_001

3D structure

PDB id

6S0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AAG

Length

22 nucleotides

Bulged bases

6S0X|1|A|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S0X|1|A|C|47
6S0X|1|A|G|48
6S0X|1|A|A|49
6S0X|1|A|U|50
6S0X|1|A|G|51
6S0X|1|A|A|52
6S0X|1|A|A|53
6S0X|1|A|G|54
*
6S0X|1|A|C|115
6S0X|1|A|G|116
6S0X|1|A|A|117
6S0X|1|A|A|118
6S0X|1|A|U|119
6S0X|1|A|G|120
*
6S0X|1|A|C|129
6S0X|1|A|A|130
*
6S0X|1|A|U|149
6S0X|1|A|A|150
6S0X|1|A|U|151
*
6S0X|1|A|A|178
6S0X|1|A|A|179
6S0X|1|A|G|180

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34