J5_6S0X_003
3D structure
- PDB id
- 6S0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- CGAGU*AGAC*GUUC*GCGUUC*GAAGUGAGAAUG
- Length
- 31 nucleotides
- Bulged bases
- 6S0X|1|A|G|630, 6S0X|1|A|G|714, 6S0X|1|A|G|1286, 6S0X|1|A|G|1290, 6S0X|1|A|A|1291, 6S0X|1|A|U|1293
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S0X|1|A|C|627
6S0X|1|A|G|628
6S0X|1|A|A|629
6S0X|1|A|G|630
6S0X|1|A|U|631
*
6S0X|1|A|A|713
6S0X|1|A|G|714
6S0X|1|A|A|715
6S0X|1|A|C|716
*
6S0X|1|A|G|854
6S0X|1|A|U|855
6S0X|1|A|U|856
6S0X|1|A|C|857
*
6S0X|1|A|G|1234
6S0X|1|A|C|1235
6S0X|1|A|G|1236
6S0X|1|A|U|1237
6S0X|1|A|U|1238
6S0X|1|A|C|1239
*
6S0X|1|A|G|1283
6S0X|1|A|A|1284
6S0X|1|A|A|1285
6S0X|1|A|G|1286
6S0X|1|A|U|1287
6S0X|1|A|G|1288
6S0X|1|A|A|1289
6S0X|1|A|G|1290
6S0X|1|A|A|1291
6S0X|1|A|A|1292
6S0X|1|A|U|1293
6S0X|1|A|G|1294
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain E
- 50S ribosomal protein L4
- Chain J
- 50S ribosomal protein L15
- Chain O
- 50S ribosomal protein L20
- Chain P
- 50S ribosomal protein L21
Coloring options: