J5_6S0X_011
3D structure
- PDB id
- 6S0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- GCAAG*CGGACGGG*CAC*GAC*GGCAGC
- Length
- 25 nucleotides
- Bulged bases
- 6S0X|1|a|A|61, 6S0X|1|a|A|108, 6S0X|1|a|C|360
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S0X|1|a|G|58
6S0X|1|a|C|59
6S0X|1|a|A|60
6S0X|1|a|A|61
6S0X|1|a|G|62
*
6S0X|1|a|C|105
6S0X|1|a|G|106
6S0X|1|a|G|107
6S0X|1|a|A|108
6S0X|1|a|C|109
6S0X|1|a|G|110
6S0X|1|a|G|111
6S0X|1|a|G|112
*
6S0X|1|a|C|322
6S0X|1|a|A|323
6S0X|1|a|C|324
*
6S0X|1|a|G|345
6S0X|1|a|A|346
6S0X|1|a|C|347
*
6S0X|1|a|G|358
6S0X|1|a|G|359
6S0X|1|a|C|360
6S0X|1|a|A|361
6S0X|1|a|G|362
6S0X|1|a|C|363
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain I
- 50S ribosomal protein L14
- Chain N
- 50S ribosomal protein L19
- Chain p
- 30S ribosomal protein S16
- Chain t
- 30S ribosomal protein S20
Coloring options: