J5_6SJ6_003
3D structure
- PDB id
- 6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- UAG*CGUGCCU*AUGAA*UG*CA
- Length
- 19 nucleotides
- Bulged bases
- 6SJ6|1|A|A|577, 6SJ6|1|A|U|605
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SJ6|1|A|U|576
6SJ6|1|A|A|577
6SJ6|1|A|G|578
*
6SJ6|1|A|C|603
6SJ6|1|A|G|604
6SJ6|1|A|U|605
6SJ6|1|A|G|606
6SJ6|1|A|C|607
6SJ6|1|A|C|608
6SJ6|1|A|U|609
*
6SJ6|1|A|A|618
6SJ6|1|A|U|619
6SJ6|1|A|G|620
6SJ6|1|A|A|621
6SJ6|1|A|A|622
*
6SJ6|1|A|U|1299
6SJ6|1|A|G|1300
*
6SJ6|1|A|C|2044
6SJ6|1|A|A|2045
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain F
- 50S ribosomal protein L4
- Chain O
- 50S ribosomal protein L15
- Chain T
- 50S ribosomal protein L20
- Chain U
- 50S ribosomal protein L21
- Chain V
- 50S ribosomal protein L22
Coloring options: