J5_6SJ6_007
3D structure
- PDB id
- 6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CGAUGAAG*CGAAUGG*CCA*UAU*AAG
- Length
- 24 nucleotides
- Bulged bases
- 6SJ6|1|A|U|50, 6SJ6|1|A|G|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SJ6|1|A|C|47
6SJ6|1|A|G|48
6SJ6|1|A|A|49
6SJ6|1|A|U|50
6SJ6|1|A|G|51
6SJ6|1|A|A|52
6SJ6|1|A|A|53
6SJ6|1|A|G|54
*
6SJ6|1|A|C|115
6SJ6|1|A|G|116
6SJ6|1|A|A|117
6SJ6|1|A|A|118
6SJ6|1|A|U|119
6SJ6|1|A|G|120
6SJ6|1|A|G|121
*
6SJ6|1|A|C|128
6SJ6|1|A|C|129
6SJ6|1|A|A|130
*
6SJ6|1|A|U|149
6SJ6|1|A|A|150
6SJ6|1|A|U|151
*
6SJ6|1|A|A|178
6SJ6|1|A|A|179
6SJ6|1|A|G|180
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
- Chain W
- 50S ribosomal protein L23
Coloring options: