J5_6SJ6_010
3D structure
- PDB id
- 6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GAAAGACC*GGAUAACAG*CCUCGAUGU*GUUCAG*CGGUCC
- Length
- 38 nucleotides
- Bulged bases
- 6SJ6|1|A|A|2089, 6SJ6|1|A|A|2475, 6SJ6|1|A|U|2476, 6SJ6|1|A|U|2636, 6SJ6|1|A|C|2637
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SJ6|1|A|G|2084
6SJ6|1|A|A|2085
6SJ6|1|A|A|2086
6SJ6|1|A|A|2087
6SJ6|1|A|G|2088
6SJ6|1|A|A|2089
6SJ6|1|A|C|2090
6SJ6|1|A|C|2091
*
6SJ6|1|A|G|2473
6SJ6|1|A|G|2474
6SJ6|1|A|A|2475
6SJ6|1|A|U|2476
6SJ6|1|A|A|2477
6SJ6|1|A|A|2478
6SJ6|1|A|C|2479
6SJ6|1|A|A|2480
6SJ6|1|A|G|2481
*
6SJ6|1|A|C|2525
6SJ6|1|A|C|2526
6SJ6|1|A|U|2527
6SJ6|1|A|C|2528
6SJ6|1|A|G|2529
6SJ6|1|A|A|2530
6SJ6|1|A|U|2531
6SJ6|1|A|G|2532
6SJ6|1|A|U|2533
*
6SJ6|1|A|G|2610
6SJ6|1|A|U|2611
6SJ6|1|A|U|2612
6SJ6|1|A|C|2613
6SJ6|1|A|A|2614
6SJ6|1|A|G|2615
*
6SJ6|1|A|C|2633
6SJ6|1|A|G|2634
6SJ6|1|A|G|2635
6SJ6|1|A|U|2636
6SJ6|1|A|C|2637
6SJ6|1|A|C|2638
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain E
- 50S ribosomal protein L3
- Chain F
- 50S ribosomal protein L4
- Chain O
- 50S ribosomal protein L15
- Chain P
- 50S ribosomal protein L16
Coloring options: