J5_6T59_005
3D structure
- PDB id
- 6T59 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- AGAAGACC*GGAUAACUG*CUUCGAUGUC*GGUUUAG*UAGUUU
- Length
- 40 nucleotides
- Bulged bases
- 6T59|1|54|A|4394, 6T59|1|54|U|4555, 6T59|1|54|U|4556
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6T59|1|54|A|3903
6T59|1|54|G|3904
6T59|1|54|A|3905
6T59|1|54|A|3906
6T59|1|54|G|3907
6T59|1|54|A|3908
6T59|1|54|C|3909
6T59|1|54|C|3910
*
6T59|1|54|G|4392
6T59|1|54|G|4393
6T59|1|54|A|4394
6T59|1|54|U|4395
6T59|1|54|A|4396
6T59|1|54|A|4397
6T59|1|54|C|4398
6T59|1|54|U|4399
6T59|1|54|G|4400
*
6T59|1|54|C|4444
6T59|1|54|U|4445
6T59|1|54|U|4446
6T59|1|54|C|4447
6T59|1|54|G|4448
6T59|1|54|A|4449
6T59|1|54|U|4450
6T59|1|54|G|4451
6T59|1|54|U|4452
6T59|1|54|C|4453
*
6T59|1|54|G|4528
6T59|1|54|G|4529
6T59|1|54|U|4530
6T59|1|54|U|4531
6T59|1|54|U|4532
6T59|1|54|A|4533
6T59|1|54|G|4534
*
6T59|1|54|U|4552
6T59|1|54|A|4553
6T59|1|54|G|4554
6T59|1|54|U|4555
6T59|1|54|U|4556
6T59|1|54|U|4557
Current chains
- Chain 54
- 28S ribosomal RNA
Nearby chains
- Chain 1
- Tubulin Beta
- Chain 23
- Transfer RNA; tRNA
- Chain A3
- Ribosomal protein L8
- Chain B3
- uL3
- Chain C3
- uL4
- Chain a3
- uL15
- Chain b3
- eL29
Coloring options: