J5_6T59_007

3D structure

PDB id

6T59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

UG*CGAUGAAG*CGAACG*CG*UA

Length

20 nucleotides

Bulged bases

6T59|1|84|U|38

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T59|1|54|U|20
6T59|1|54|G|21
*
6T59|1|84|C|35
6T59|1|84|G|36
6T59|1|84|A|37
6T59|1|84|U|38
6T59|1|84|G|39
6T59|1|84|A|40
6T59|1|84|A|41
6T59|1|84|G|42
*
6T59|1|84|C|101
6T59|1|84|G|102
6T59|1|84|A|103
6T59|1|84|A|104
6T59|1|84|C|105
6T59|1|84|G|106
*
6T59|1|84|C|113
6T59|1|84|G|114
*
6T59|1|84|U|136
6T59|1|84|A|137

Current chains

Chain 54

28S ribosomal RNA

Chain 84

5.8S ribosomal RNA

Nearby chains

Chain N3

Ribosomal protein L15

Chain X3

uL23

Chain h3

uL29

Chain j3

Ribosomal protein L37

Chain l3

eL39