J5_6W6L_001
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- CGAUGAAG*CGAACG*CG*UA*UG
- Length
- 20 nucleotides
- Bulged bases
- 6W6L|1|D|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6W6L|1|D|C|35
6W6L|1|D|G|36
6W6L|1|D|A|37
6W6L|1|D|U|38
6W6L|1|D|G|39
6W6L|1|D|A|40
6W6L|1|D|A|41
6W6L|1|D|G|42
*
6W6L|1|D|C|101
6W6L|1|D|G|102
6W6L|1|D|A|103
6W6L|1|D|A|104
6W6L|1|D|C|105
6W6L|1|D|G|106
*
6W6L|1|D|C|113
6W6L|1|D|G|114
*
6W6L|1|D|U|136
6W6L|1|D|A|137
*
6W6L|1|t|U|20
6W6L|1|t|G|21
Current chains
- Chain D
- 5.8S ribosomal RNA
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain O
- 60S ribosomal protein L15
- Chain Y
- 60S ribosomal protein L23a
- Chain i
- 60S ribosomal protein L35
- Chain k
- 60S ribosomal protein L37
- Chain m
- 60S ribosomal protein L39
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