3D structure

PDB id
6W6P (explore in PDB, NAKB, or RNA 3D Hub)
Description
MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CUGG*CGUG*CUGUUG*CCAGAAAG*CAAG
Length
26 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6W6P|1|a|C|33
6W6P|1|a|U|34
6W6P|1|a|G|35
6W6P|1|a|G|36
*
6W6P|1|a|C|418
6W6P|1|a|G|419
6W6P|1|a|U|420
6W6P|1|a|G|421
*
6W6P|1|a|C|451
6W6P|1|a|U|452
6W6P|1|a|G|453
6W6P|1|a|U|454
6W6P|1|a|U|455
6W6P|1|a|G|456
*
6W6P|1|a|C|508
6W6P|1|a|C|509
6W6P|1|a|A|510
6W6P|1|a|G|511
6W6P|1|a|A|512
6W6P|1|a|A|513
6W6P|1|a|A|514
6W6P|1|a|G|515
*
6W6P|1|a|C|560
6W6P|1|a|A|561
6W6P|1|a|A|562
6W6P|1|a|G|563

Current chains

Chain a
16S rRNA

Nearby chains

Chain d
30S ribosomal protein S4
Chain l
30S ribosomal protein S12

Coloring options:

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