J5_6W7N_002

3D structure

PDB id

6W7N (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-low-Mg2+ Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAAG*CGGACGGG*CACU*AGACU*AGGCAG

Length

27 nucleotides

Bulged bases

6W7N|1|A|A|109, 6W7N|1|A|C|352, 6W7N|1|A|A|353

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W7N|1|A|C|58
6W7N|1|A|A|59
6W7N|1|A|A|60
6W7N|1|A|G|61
*
6W7N|1|A|C|106
6W7N|1|A|G|107
6W7N|1|A|G|108
6W7N|1|A|A|109
6W7N|1|A|C|110
6W7N|1|A|G|111
6W7N|1|A|G|112
6W7N|1|A|G|113
*
6W7N|1|A|C|314
6W7N|1|A|A|315
6W7N|1|A|C|316
6W7N|1|A|U|317
*
6W7N|1|A|A|336
6W7N|1|A|G|337
6W7N|1|A|A|338
6W7N|1|A|C|339
6W7N|1|A|U|340
*
6W7N|1|A|A|349
6W7N|1|A|G|350
6W7N|1|A|G|351
6W7N|1|A|C|352
6W7N|1|A|A|353
6W7N|1|A|G|354

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20