J5_6ZU5_004
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AGAAGACC*GGAUAACUG*CUUCGAUGUC*GGUUUAG*UAGUUU
- Length
- 40 nucleotides
- Bulged bases
- 6ZU5|1|L50|A|1873, 6ZU5|1|L50|A|2208, 6ZU5|1|L50|G|2265, 6ZU5|1|L50|U|2266, 6ZU5|1|L50|U|2345, 6ZU5|1|L50|U|2369, 6ZU5|1|L50|U|2370
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZU5|1|L50|A|1868
6ZU5|1|L50|G|1869
6ZU5|1|L50|A|1870
6ZU5|1|L50|A|1871
6ZU5|1|L50|G|1872
6ZU5|1|L50|A|1873
6ZU5|1|L50|C|1874
6ZU5|1|L50|C|1875
*
6ZU5|1|L50|G|2206
6ZU5|1|L50|G|2207
6ZU5|1|L50|A|2208
6ZU5|1|L50|U|2209
6ZU5|1|L50|A|2210
6ZU5|1|L50|A|2211
6ZU5|1|L50|C|2212
6ZU5|1|L50|U|2213
6ZU5|1|L50|G|2214
*
6ZU5|1|L50|C|2258
6ZU5|1|L50|U|2259
6ZU5|1|L50|U|2260
6ZU5|1|L50|C|2261
6ZU5|1|L50|G|2262
6ZU5|1|L50|A|2263
6ZU5|1|L50|U|2264
6ZU5|1|L50|G|2265
6ZU5|1|L50|U|2266
6ZU5|1|L50|C|2267
*
6ZU5|1|L50|G|2342
6ZU5|1|L50|G|2343
6ZU5|1|L50|U|2344
6ZU5|1|L50|U|2345
6ZU5|1|L50|U|2346
6ZU5|1|L50|A|2347
6ZU5|1|L50|G|2348
*
6ZU5|1|L50|U|2366
6ZU5|1|L50|A|2367
6ZU5|1|L50|G|2368
6ZU5|1|L50|U|2369
6ZU5|1|L50|U|2370
6ZU5|1|L50|U|2371
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain LA0
- uL2
- Chain LAA
- uL15
- Chain LB0
- uL3
- Chain LBB
- eL29
- Chain LC0
- uL4
- Chain LP0
- uL22
Coloring options: