J5_6ZU5_006

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAAG*CGGACGGC*GAG*CAC*GGCAG

Length

23 nucleotides

Bulged bases

6ZU5|1|S60|A|82, 6ZU5|1|S60|C|333

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZU5|1|S60|C|53
6ZU5|1|S60|A|54
6ZU5|1|S60|A|55
6ZU5|1|S60|G|56
*
6ZU5|1|S60|C|79
6ZU5|1|S60|G|80
6ZU5|1|S60|G|81
6ZU5|1|S60|A|82
6ZU5|1|S60|C|83
6ZU5|1|S60|G|84
6ZU5|1|S60|G|85
6ZU5|1|S60|C|86
*
6ZU5|1|S60|G|295
6ZU5|1|S60|A|296
6ZU5|1|S60|G|297
*
6ZU5|1|S60|C|318
6ZU5|1|S60|A|319
6ZU5|1|S60|C|320
*
6ZU5|1|S60|G|331
6ZU5|1|S60|G|332
6ZU5|1|S60|C|333
6ZU5|1|S60|A|334
6ZU5|1|S60|G|335

Current chains

Chain S60

18S rRNA

Nearby chains

Chain LV0

uL14

Chain SE0

eS4

Chain SG0

eS6

Chain SI0

eS8

Chain SY0

eS24