3D structure

PDB id
7ACJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAUCAACCGAGAUUC*GAGCAG*CUAAAUAC
Length
44 nucleotides
Bulged bases
7ACJ|1|1|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ACJ|1|1|G|45
7ACJ|1|1|G|46
*
7ACJ|1|1|C|179
7ACJ|1|1|G|180
7ACJ|1|1|A|181
7ACJ|1|1|A|182
7ACJ|1|1|C|183
*
7ACJ|1|1|G|214
7ACJ|1|1|G|215
7ACJ|1|1|A|216
7ACJ|1|1|A|217
7ACJ|1|1|A|218
7ACJ|1|1|A|219
7ACJ|1|1|G|220
7ACJ|1|1|A|221
7ACJ|1|1|A|222
7ACJ|1|1|A|223
7ACJ|1|1|U|224
7ACJ|1|1|C|225
7ACJ|1|1|A|226
7ACJ|1|1|A|227
7ACJ|1|1|C|228
7ACJ|1|1|C|229
7ACJ|1|1|G|230
7ACJ|1|1|A|231
7ACJ|1|1|G|232
7ACJ|1|1|A|233
7ACJ|1|1|U|234
7ACJ|1|1|U|235
7ACJ|1|1|C|236
*
7ACJ|1|1|G|261
7ACJ|1|1|A|262
7ACJ|1|1|G|263
7ACJ|1|1|C|264
7ACJ|1|1|A|265
7ACJ|1|1|G|266
*
7ACJ|1|1|C|426
7ACJ|1|1|U|427
7ACJ|1|1|A|428
7ACJ|1|1|A|429
7ACJ|1|1|A|430
7ACJ|1|1|U|431
7ACJ|1|1|A|432
7ACJ|1|1|C|433

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain L
50S ribosomal protein L15
Chain d
50S ribosomal protein L34

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1828 s