J5_7ASN_004

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GGAACUCGGCAAAAUGAC*GUG*CC*GUGAAUAGG*CACUGUC

Length

39 nucleotides

Bulged bases

7ASN|1|A|G|1785, 7ASN|1|A|G|1790

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASN|1|A|G|1710
7ASN|1|A|G|1711
7ASN|1|A|A|1712
7ASN|1|A|A|1713
7ASN|1|A|C|1714
7ASN|1|A|U|1715
7ASN|1|A|C|1716
7ASN|1|A|G|1717
7ASN|1|A|G|1718
7ASN|1|A|C|1719
7ASN|1|A|A|1720
7ASN|1|A|A|1721
7ASN|1|A|A|1722
7ASN|1|A|A|1723
7ASN|1|A|U|1724
7ASN|1|A|G|1725
7ASN|1|A|A|1726
7ASN|1|A|C|1727
*
7ASN|1|A|G|1749
7ASN|1|A|U|1750
7ASN|1|A|G|1751
*
7ASN|1|A|C|1778
7ASN|1|A|C|1779
*
7ASN|1|A|G|1783
7ASN|1|A|U|1784
7ASN|1|A|G|1785
7ASN|1|A|A|1786
7ASN|1|A|A|1787
7ASN|1|A|U|1788
7ASN|1|A|A|1789
7ASN|1|A|G|1790
7ASN|1|A|G|1791
*
7ASN|1|A|C|2015
7ASN|1|A|A|2016
7ASN|1|A|C|2017
7ASN|1|A|U|2018
7ASN|1|A|G|2019
7ASN|1|A|U|2020
7ASN|1|A|C|2021

Current chains

Chain A

23S

Nearby chains

Chain D

50S ribosomal protein L3

Chain G

50S ribosomal protein L14

Chain N

50S ribosomal protein L19