J5_7ASN_006

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GAAAGACC*GGAUAACA*UCG(2MA)UGUC*GGUUCAG*CGGUCC

Length

37 nucleotides

Bulged bases

7ASN|1|A|A|2089, 7ASN|1|A|A|2475, 7ASN|1|A|U|2476, 7ASN|1|A|G|2532, 7ASN|1|A|U|2612, 7ASN|1|A|U|2636

QA status

Modified nucleotides: 2MA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASN|1|A|G|2084
7ASN|1|A|A|2085
7ASN|1|A|A|2086
7ASN|1|A|A|2087
7ASN|1|A|G|2088
7ASN|1|A|A|2089
7ASN|1|A|C|2090
7ASN|1|A|C|2091
*
7ASN|1|A|G|2473
7ASN|1|A|G|2474
7ASN|1|A|A|2475
7ASN|1|A|U|2476
7ASN|1|A|A|2477
7ASN|1|A|A|2478
7ASN|1|A|C|2479
7ASN|1|A|A|2480
*
7ASN|1|A|U|2527
7ASN|1|A|C|2528
7ASN|1|A|G|2529
7ASN|1|A|2MA|2530
7ASN|1|A|U|2531
7ASN|1|A|G|2532
7ASN|1|A|U|2533
7ASN|1|A|C|2534
*
7ASN|1|A|G|2609
7ASN|1|A|G|2610
7ASN|1|A|U|2611
7ASN|1|A|U|2612
7ASN|1|A|C|2613
7ASN|1|A|A|2614
7ASN|1|A|G|2615
*
7ASN|1|A|C|2633
7ASN|1|A|G|2634
7ASN|1|A|G|2635
7ASN|1|A|U|2636
7ASN|1|A|C|2637
7ASN|1|A|C|2638

Current chains

Chain A

23S

Nearby chains

Chain D

50S ribosomal protein L3

Chain E

50S ribosomal protein L4

Chain F

50S ribosomal protein L2

Chain L

50S ribosomal protein L15

Chain Y

50S ribosomal protein L16

Chain b

50S ribosomal protein L32