J5_7ASN_008

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GC*GCACAC*GGAAGAGAAAGAAAAUUCGAUU*AAGAG*CUAAAUAC

Length

43 nucleotides

Bulged bases

7ASN|1|A|C|184, 7ASN|1|A|A|226, 7ASN|1|A|U|232

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASN|1|A|G|45
7ASN|1|A|C|46
*
7ASN|1|A|G|181
7ASN|1|A|C|182
7ASN|1|A|A|183
7ASN|1|A|C|184
7ASN|1|A|A|185
7ASN|1|A|C|186
*
7ASN|1|A|G|217
7ASN|1|A|G|218
7ASN|1|A|A|219
7ASN|1|A|A|220
7ASN|1|A|G|221
7ASN|1|A|A|222
7ASN|1|A|G|223
7ASN|1|A|A|224
7ASN|1|A|A|225
7ASN|1|A|A|226
7ASN|1|A|G|227
7ASN|1|A|A|228
7ASN|1|A|A|229
7ASN|1|A|A|230
7ASN|1|A|A|231
7ASN|1|A|U|232
7ASN|1|A|U|233
7ASN|1|A|C|234
7ASN|1|A|G|235
7ASN|1|A|A|236
7ASN|1|A|U|237
7ASN|1|A|U|238
*
7ASN|1|A|A|265
7ASN|1|A|A|266
7ASN|1|A|G|267
7ASN|1|A|A|268
7ASN|1|A|G|269
*
7ASN|1|A|C|472
7ASN|1|A|U|473
7ASN|1|A|A|474
7ASN|1|A|A|475
7ASN|1|A|A|476
7ASN|1|A|U|477
7ASN|1|A|A|478
7ASN|1|A|C|479

Current chains

Chain A

23S

Nearby chains

Chain 2

50S ribosomal protein L34