J5_7ASO_006
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GCAAAAUGAC*GUG*CC*GUGAAUAGG*CAC
- Length
- 27 nucleotides
- Bulged bases
- 7ASO|1|Y|G|1785, 7ASO|1|Y|G|1790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ASO|1|Y|G|1718
7ASO|1|Y|C|1719
7ASO|1|Y|A|1720
7ASO|1|Y|A|1721
7ASO|1|Y|A|1722
7ASO|1|Y|A|1723
7ASO|1|Y|U|1724
7ASO|1|Y|G|1725
7ASO|1|Y|A|1726
7ASO|1|Y|C|1727
*
7ASO|1|Y|G|1749
7ASO|1|Y|U|1750
7ASO|1|Y|G|1751
*
7ASO|1|Y|C|1778
7ASO|1|Y|C|1779
*
7ASO|1|Y|G|1783
7ASO|1|Y|U|1784
7ASO|1|Y|G|1785
7ASO|1|Y|A|1786
7ASO|1|Y|A|1787
7ASO|1|Y|U|1788
7ASO|1|Y|A|1789
7ASO|1|Y|G|1790
7ASO|1|Y|G|1791
*
7ASO|1|Y|C|2015
7ASO|1|Y|A|2016
7ASO|1|Y|C|2017
Current chains
- Chain Y
- 23S
Nearby chains
- Chain N
- 50S ribosomal protein L14
- Chain X
- Small subunit ribosomal RNA; SSU rRNA
- Chain e
- 50S ribosomal protein L3
Coloring options: