J5_7ASO_007
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GAAAGACC*GGAUAACAG*CCUCGAUGUC*GGUUCAG*CGGUCC
- Length
- 40 nucleotides
- Bulged bases
- 7ASO|1|Y|A|2089, 7ASO|1|Y|A|2475, 7ASO|1|Y|U|2476, 7ASO|1|Y|G|2532, 7ASO|1|Y|U|2533, 7ASO|1|Y|U|2612, 7ASO|1|Y|U|2636, 7ASO|1|Y|C|2637
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ASO|1|Y|G|2084
7ASO|1|Y|A|2085
7ASO|1|Y|A|2086
7ASO|1|Y|A|2087
7ASO|1|Y|G|2088
7ASO|1|Y|A|2089
7ASO|1|Y|C|2090
7ASO|1|Y|C|2091
*
7ASO|1|Y|G|2473
7ASO|1|Y|G|2474
7ASO|1|Y|A|2475
7ASO|1|Y|U|2476
7ASO|1|Y|A|2477
7ASO|1|Y|A|2478
7ASO|1|Y|C|2479
7ASO|1|Y|A|2480
7ASO|1|Y|G|2481
*
7ASO|1|Y|C|2525
7ASO|1|Y|C|2526
7ASO|1|Y|U|2527
7ASO|1|Y|C|2528
7ASO|1|Y|G|2529
7ASO|1|Y|A|2530
7ASO|1|Y|U|2531
7ASO|1|Y|G|2532
7ASO|1|Y|U|2533
7ASO|1|Y|C|2534
*
7ASO|1|Y|G|2609
7ASO|1|Y|G|2610
7ASO|1|Y|U|2611
7ASO|1|Y|U|2612
7ASO|1|Y|C|2613
7ASO|1|Y|A|2614
7ASO|1|Y|G|2615
*
7ASO|1|Y|C|2633
7ASO|1|Y|G|2634
7ASO|1|Y|G|2635
7ASO|1|Y|U|2636
7ASO|1|Y|C|2637
7ASO|1|Y|C|2638
Current chains
- Chain Y
- 23S
Nearby chains
- Chain J
- 50S ribosomal protein L4
- Chain O
- 50S ribosomal protein L15
- Chain P
- 50S ribosomal protein L16
- Chain b
- 50S ribosomal protein L27
- Chain e
- 50S ribosomal protein L3
- Chain g
- 50S ribosomalprotein L32p
Coloring options: