J5_7AZS_004
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAAG*CGGACGGG*CAG*CAC*GGCAG
- Length
- 23 nucleotides
- Bulged bases
- 7AZS|1|16SB|A|748, 7AZS|1|16SB|C|993
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7AZS_004 not in the Motif Atlas
- Homologous match to J5_4LFB_002
- Geometric discrepancy: 0.0754
- The information below is about J5_4LFB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_58574.1
- Basepair signature
- cWW-F-tSS-cSS-F-cWW-cWW-cWW-F-F-cWW-F-F-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7AZS|1|16SB|C|704
7AZS|1|16SB|A|705
7AZS|1|16SB|A|706
7AZS|1|16SB|G|707
*
7AZS|1|16SB|C|745
7AZS|1|16SB|G|746
7AZS|1|16SB|G|747
7AZS|1|16SB|A|748
7AZS|1|16SB|C|749
7AZS|1|16SB|G|750
7AZS|1|16SB|G|751
7AZS|1|16SB|G|752
*
7AZS|1|16SB|C|955
7AZS|1|16SB|A|956
7AZS|1|16SB|G|957
*
7AZS|1|16SB|C|978
7AZS|1|16SB|A|979
7AZS|1|16SB|C|980
*
7AZS|1|16SB|G|991
7AZS|1|16SB|G|992
7AZS|1|16SB|C|993
7AZS|1|16SB|A|994
7AZS|1|16SB|G|995
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain L14B
- 50S ribosomal protein L14
- Chain L19B
- 50S ribosomal protein L19
- Chain S16B
- 30S ribosomal protein S16
- Chain S20B
- 30S ribosomal protein S20
Coloring options: