J5_7AZY_003
3D structure
- PDB id
- 7AZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Context-specific inhibition of eukaryotic translation by macrolide antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.877 Å
Loop
- Sequence
- CGAG*CGUAA*UGAACGUAG*CGA*UAAGAG
- Length
- 27 nucleotides
- Bulged bases
- 7AZY|1|E|U|719, 7AZY|1|E|A|784, 7AZY|1|E|G|785
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7AZY_003 not in the Motif Atlas
- Homologous match to J5_8P9A_012
- Geometric discrepancy: 0.0868
- The information below is about J5_8P9A_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_56629.1
- Basepair signature
- cWW-F-F-tSS-F-cWW-cWW-F-F-cWW-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7AZY|1|E|C|675
7AZY|1|E|G|676
7AZY|1|E|A|677
7AZY|1|E|G|678
*
7AZY|1|E|C|702
7AZY|1|E|G|703
7AZY|1|E|U|704
7AZY|1|E|A|705
7AZY|1|E|A|706
*
7AZY|1|E|U|713
7AZY|1|E|G|714
7AZY|1|E|A|715
7AZY|1|E|A|716
7AZY|1|E|C|717
7AZY|1|E|G|718
7AZY|1|E|U|719
7AZY|1|E|A|720
7AZY|1|E|G|721
*
7AZY|1|E|C|749
7AZY|1|E|G|750
7AZY|1|E|A|751
*
7AZY|1|E|U|782
7AZY|1|E|A|783
7AZY|1|E|A|784
7AZY|1|E|G|785
7AZY|1|E|A|786
7AZY|1|E|G|787
Current chains
- Chain E
- 25S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L15-A
- Chain S
- 60S ribosomal protein L28
- Chain W
- 60S ribosomal protein L29
- Chain d
- 60S ribosomal protein L36-A
- Chain k
- 60S ribosomal protein L13-A
- Chain m
- 60S ribosomal protein L18-A
- Chain p
- 60S ribosomal protein L4-A
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