J5_7D80_008
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CUGGCGGCA*UGCCGCGUGU*ACUUUCAG*CAGAAGAAG*CAAG
- Length
- 40 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|B|C|36
7D80|1|B|U|37
7D80|1|B|G|38
7D80|1|B|G|39
7D80|1|B|C|40
7D80|1|B|G|41
7D80|1|B|G|42
7D80|1|B|C|43
7D80|1|B|A|44
*
7D80|1|B|U|398
7D80|1|B|G|399
7D80|1|B|C|400
7D80|1|B|C|401
7D80|1|B|G|402
7D80|1|B|C|403
7D80|1|B|G|404
7D80|1|B|U|405
7D80|1|B|G|406
7D80|1|B|U|407
*
7D80|1|B|A|435
7D80|1|B|C|436
7D80|1|B|U|437
7D80|1|B|U|438
7D80|1|B|U|439
7D80|1|B|C|440
7D80|1|B|A|441
7D80|1|B|G|442
*
7D80|1|B|C|492
7D80|1|B|A|493
7D80|1|B|G|494
7D80|1|B|A|495
7D80|1|B|A|496
7D80|1|B|G|497
7D80|1|B|A|498
7D80|1|B|A|499
7D80|1|B|G|500
*
7D80|1|B|C|545
7D80|1|B|A|546
7D80|1|B|A|547
7D80|1|B|G|548
Current chains
- Chain B
- 16S ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S4
- Chain M
- 30S ribosomal protein S12
- Chain Q
- 30S ribosomal protein S16
Coloring options: