J5_7F0D_005
3D structure
- PDB id
- 7F0D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAAGG*CCGCAGC*GCGAG*CGACCCAC*GUGAAUAG
- Length
- 33 nucleotides
- Bulged bases
- 7F0D|1|A|C|757, 7F0D|1|A|C|758, 7F0D|1|A|C|759
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7F0D|1|A|C|704
7F0D|1|A|A|705
7F0D|1|A|A|706
7F0D|1|A|G|707
7F0D|1|A|G|708
*
7F0D|1|A|C|727
7F0D|1|A|C|728
7F0D|1|A|G|729
7F0D|1|A|C|730
7F0D|1|A|A|731
7F0D|1|A|G|732
7F0D|1|A|C|733
*
7F0D|1|A|G|738
7F0D|1|A|C|739
7F0D|1|A|G|740
7F0D|1|A|A|741
7F0D|1|A|G|742
*
7F0D|1|A|C|754
7F0D|1|A|G|755
7F0D|1|A|A|756
7F0D|1|A|C|757
7F0D|1|A|C|758
7F0D|1|A|C|759
7F0D|1|A|A|760
7F0D|1|A|C|761
*
7F0D|1|A|G|778
7F0D|1|A|U|779
7F0D|1|A|G|780
7F0D|1|A|A|781
7F0D|1|A|A|782
7F0D|1|A|U|783
7F0D|1|A|A|784
7F0D|1|A|G|785
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
Coloring options: