J5_7KWG_001

3D structure

PDB id

7KWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 30S ribosomal subunit in presence of spermidine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CUGG*CGUG*CUGUUA*UCAGAAAG*CAAG

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7KWG|1|a|C|37
7KWG|1|a|U|38
7KWG|1|a|G|39
7KWG|1|a|G|40
*
7KWG|1|a|C|411
7KWG|1|a|G|412
7KWG|1|a|U|413
7KWG|1|a|G|414
*
7KWG|1|a|C|444
7KWG|1|a|U|445
7KWG|1|a|G|446
7KWG|1|a|U|447
7KWG|1|a|U|448
7KWG|1|a|A|449
*
7KWG|1|a|U|501
7KWG|1|a|C|502
7KWG|1|a|A|503
7KWG|1|a|G|504
7KWG|1|a|A|505
7KWG|1|a|A|506
7KWG|1|a|A|507
7KWG|1|a|G|508
*
7KWG|1|a|C|553
7KWG|1|a|A|554
7KWG|1|a|A|555
7KWG|1|a|G|556

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain l

30S ribosomal protein S12