J5_7LS2_007
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUA(OMG)
- Length
- 35 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS2|1|m2|C|30
7LS2|1|m2|U|31
7LS2|1|m2|U|32
7LS2|1|m2|G|33
7LS2|1|m2|U|34
*
7LS2|1|m2|A|523
7LS2|1|m2|A|524
7LS2|1|m2|A|525
7LS2|1|m2|U|526
7LS2|1|m2|A|527
7LS2|1|m2|A|528
7LS2|1|m2|C|529
*
7LS2|1|m2|G|560
7LS2|1|m2|G|561
7LS2|1|m2|A|562
7LS2|1|m2|A|563
7LS2|1|m2|U|564
7LS2|1|m2|G|565
7LS2|1|m2|A|566
7LS2|1|m2|G|567
*
7LS2|1|m2|C|587
7LS2|1|m2|G|588
7LS2|1|m2|A|589
7LS2|1|m2|G|590
7LS2|1|m2|G|591
7LS2|1|m2|A|592
7LS2|1|m2|U|593
7LS2|1|m2|C|594
7LS2|1|m2|C|595
7LS2|1|m2|A|596
7LS2|1|m2|U|597
*
7LS2|1|m2|A|643
7LS2|1|m2|U|644
7LS2|1|m2|A|645
7LS2|1|m2|OMG|646
Current chains
- Chain m2
- 18S rRNA
Nearby chains
- Chain E3
- 40S ribosomal protein S23
- Chain L3
- 40S ribosomal protein S9
- Chain T3
- 40S ribosomal protein S30
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