J5_7MSZ_005
3D structure
- PDB id
- 7MSZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Trans_R1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCAAAAUGC*GA*UC*GAAACCAGU*AAC
- Length
- 25 nucleotides
- Bulged bases
- 7MSZ|1|A|A|1992, 7MSZ|1|A|G|1997
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7MSZ_005 not in the Motif Atlas
- Homologous match to J5_5J7L_016
- Geometric discrepancy: 0.1969
- The information below is about J5_5J7L_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_62523.6
- Basepair signature
- cWW-F-F-F-cWW-F-F-F-F-F-F-F-F-F-cWW-F-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7MSZ|1|A|G|1909
7MSZ|1|A|C|1910
7MSZ|1|A|A|1911
7MSZ|1|A|A|1912
7MSZ|1|A|A|1913
7MSZ|1|A|A|1914
7MSZ|1|A|U|1915
7MSZ|1|A|G|1916
7MSZ|1|A|C|1917
*
7MSZ|1|A|G|1941
7MSZ|1|A|A|1942
*
7MSZ|1|A|U|1985
7MSZ|1|A|C|1986
*
7MSZ|1|A|G|1990
7MSZ|1|A|A|1991
7MSZ|1|A|A|1992
7MSZ|1|A|A|1993
7MSZ|1|A|C|1994
7MSZ|1|A|C|1995
7MSZ|1|A|A|1996
7MSZ|1|A|G|1997
7MSZ|1|A|U|1998
*
7MSZ|1|A|A|2226
7MSZ|1|A|A|2227
7MSZ|1|A|C|2228
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L14
- Chain P
- 50S ribosomal protein L19
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: