J5_7NWG_001
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAAGGAGUC*GGACCCG*CUGGUUC*GCC*GCAGAUCUUG
- Length
- 36 nucleotides
- Bulged bases
- 7NWG|1|51|C|2289, 7NWG|1|51|U|2350
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|51|C|1332
7NWG|1|51|A|1333
7NWG|1|51|A|1334
7NWG|1|51|G|1335
7NWG|1|51|G|1336
7NWG|1|51|A|1337
7NWG|1|51|G|1338
7NWG|1|51|U|1339
7NWG|1|51|C|1340
*
7NWG|1|51|G|1516
7NWG|1|51|G|1517
7NWG|1|51|A|1518
7NWG|1|51|C|1519
7NWG|1|51|C|1520
7NWG|1|51|C|1521
7NWG|1|51|G|1522
*
7NWG|1|51|C|1655
7NWG|1|51|U|1656
7NWG|1|51|G|1657
7NWG|1|51|G|1658
7NWG|1|51|U|1659
7NWG|1|51|U|1660
7NWG|1|51|C|1661
*
7NWG|1|51|G|2288
7NWG|1|51|C|2289
7NWG|1|51|C|2290
*
7NWG|1|51|G|2345
7NWG|1|51|C|2346
7NWG|1|51|A|2347
7NWG|1|51|G|2348
7NWG|1|51|A|2349
7NWG|1|51|U|2350
7NWG|1|51|C|2351
7NWG|1|51|U|2352
7NWG|1|51|U|2353
7NWG|1|51|G|2354
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 81
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C3
- uL4
- Chain L3
- L13
- Chain N3
- Ribosomal protein L15
- Chain a3
- uL15
- Chain e3
- eL32
- Chain r3
- eL28
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