J5_7NWG_012
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AGAAGACCC*GGGAUAACUG*CUUCGAUGUC*GGUUUAGACCGU*ACAGGUUAGUUU
- Length
- 53 nucleotides
- Bulged bases
- 7NWG|1|51|A|3908, 7NWG|1|51|A|4394, 7NWG|1|51|G|4451, 7NWG|1|51|C|4547, 7NWG|1|51|A|4548, 7NWG|1|51|U|4555, 7NWG|1|51|U|4556
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|51|A|3903
7NWG|1|51|G|3904
7NWG|1|51|A|3905
7NWG|1|51|A|3906
7NWG|1|51|G|3907
7NWG|1|51|A|3908
7NWG|1|51|C|3909
7NWG|1|51|C|3910
7NWG|1|51|C|3911
*
7NWG|1|51|G|4391
7NWG|1|51|G|4392
7NWG|1|51|G|4393
7NWG|1|51|A|4394
7NWG|1|51|U|4395
7NWG|1|51|A|4396
7NWG|1|51|A|4397
7NWG|1|51|C|4398
7NWG|1|51|U|4399
7NWG|1|51|G|4400
*
7NWG|1|51|C|4444
7NWG|1|51|U|4445
7NWG|1|51|U|4446
7NWG|1|51|C|4447
7NWG|1|51|G|4448
7NWG|1|51|A|4449
7NWG|1|51|U|4450
7NWG|1|51|G|4451
7NWG|1|51|U|4452
7NWG|1|51|C|4453
*
7NWG|1|51|G|4528
7NWG|1|51|G|4529
7NWG|1|51|U|4530
7NWG|1|51|U|4531
7NWG|1|51|U|4532
7NWG|1|51|A|4533
7NWG|1|51|G|4534
7NWG|1|51|A|4535
7NWG|1|51|C|4536
7NWG|1|51|C|4537
7NWG|1|51|G|4538
7NWG|1|51|U|4539
*
7NWG|1|51|A|4546
7NWG|1|51|C|4547
7NWG|1|51|A|4548
7NWG|1|51|G|4549
7NWG|1|51|G|4550
7NWG|1|51|U|4551
7NWG|1|51|U|4552
7NWG|1|51|A|4553
7NWG|1|51|G|4554
7NWG|1|51|U|4555
7NWG|1|51|U|4556
7NWG|1|51|U|4557
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 1
- Sec61Beta
- Chain A3
- L8
- Chain B3
- uL3
- Chain C3
- uL4
- Chain b3
- eL29
- Chain q3
- Transfer RNA; tRNA
Coloring options: