J5_7NWG_013
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUUGAGCUUGA*UUUGA*UACACCUGUCAAACGGUAACGCAGGUGUC*GCCUCACGAUCC*GGUGUCAGAAAAGUUACCAC
- Length
- 77 nucleotides
- Bulged bases
- 7NWG|1|51|G|3922, 7NWG|1|51|A|4214, 7NWG|1|51|A|4376, 7NWG|1|51|A|4379, 7NWG|1|51|A|4385
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|51|G|3913
7NWG|1|51|U|3914
7NWG|1|51|U|3915
7NWG|1|51|G|3916
7NWG|1|51|A|3917
7NWG|1|51|G|3918
7NWG|1|51|C|3919
7NWG|1|51|U|3920
7NWG|1|51|U|3921
7NWG|1|51|G|3922
7NWG|1|51|A|3923
*
7NWG|1|51|U|4188
7NWG|1|51|U|4189
7NWG|1|51|U|4190
7NWG|1|51|G|4191
7NWG|1|51|A|4192
*
7NWG|1|51|U|4202
7NWG|1|51|A|4203
7NWG|1|51|C|4204
7NWG|1|51|A|4205
7NWG|1|51|C|4206
7NWG|1|51|C|4207
7NWG|1|51|U|4208
7NWG|1|51|G|4209
7NWG|1|51|U|4210
7NWG|1|51|C|4211
7NWG|1|51|A|4212
7NWG|1|51|A|4213
7NWG|1|51|A|4214
7NWG|1|51|C|4215
7NWG|1|51|G|4216
7NWG|1|51|G|4217
7NWG|1|51|U|4218
7NWG|1|51|A|4219
7NWG|1|51|A|4220
7NWG|1|51|C|4221
7NWG|1|51|G|4222
7NWG|1|51|C|4223
7NWG|1|51|A|4224
7NWG|1|51|G|4225
7NWG|1|51|G|4226
7NWG|1|51|U|4227
7NWG|1|51|G|4228
7NWG|1|51|U|4229
7NWG|1|51|C|4230
*
7NWG|1|51|G|4331
7NWG|1|51|C|4332
7NWG|1|51|C|4333
7NWG|1|51|U|4334
7NWG|1|51|C|4335
7NWG|1|51|A|4336
7NWG|1|51|C|4337
7NWG|1|51|G|4338
7NWG|1|51|A|4339
7NWG|1|51|U|4340
7NWG|1|51|C|4341
7NWG|1|51|C|4342
*
7NWG|1|51|G|4370
7NWG|1|51|G|4371
7NWG|1|51|U|4372
7NWG|1|51|G|4373
7NWG|1|51|U|4374
7NWG|1|51|C|4375
7NWG|1|51|A|4376
7NWG|1|51|G|4377
7NWG|1|51|A|4378
7NWG|1|51|A|4379
7NWG|1|51|A|4380
7NWG|1|51|A|4381
7NWG|1|51|G|4382
7NWG|1|51|U|4383
7NWG|1|51|U|4384
7NWG|1|51|A|4385
7NWG|1|51|C|4386
7NWG|1|51|C|4387
7NWG|1|51|A|4388
7NWG|1|51|C|4389
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 1
- Sec61Beta
- Chain 33
- Transfer RNA; tRNA
- Chain A3
- L8
- Chain C3
- uL4
- Chain I3
- 60S ribosomal protein L10
- Chain N3
- Ribosomal protein L15
- Chain Q3
- L18
- Chain T3
- eL21
- Chain a3
- uL15
- Chain b3
- eL29
- Chain o3
- eL42
Coloring options: