J5_7O19_002
3D structure
- PDB id
- 7O19 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG
- Length
- 28 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7O19_002 not in the Motif Atlas
- Homologous match to J5_5J7L_002
- Geometric discrepancy: 0.0796
- The information below is about J5_5J7L_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_67416.1
- Basepair signature
- cWW-F-F-F-cWW-tHW-F-tHW-tSS-cWW-cHW-cWW-F-cWW-F-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
7O19|1|AA|C|36
7O19|1|AA|U|37
7O19|1|AA|G|38
7O19|1|AA|G|39
*
7O19|1|AA|C|403
7O19|1|AA|G|404
7O19|1|AA|U|405
7O19|1|AA|G|406
*
7O19|1|AA|C|436
7O19|1|AA|U|437
7O19|1|AA|U|438
7O19|1|AA|U|439
7O19|1|AA|C|440
7O19|1|AA|A|441
7O19|1|AA|G|442
*
7O19|1|AA|C|492
7O19|1|AA|A|493
7O19|1|AA|G|494
7O19|1|AA|A|495
7O19|1|AA|A|496
7O19|1|AA|G|497
7O19|1|AA|A|498
7O19|1|AA|A|499
7O19|1|AA|G|500
*
7O19|1|AA|C|545
7O19|1|AA|A|546
7O19|1|AA|A|547
7O19|1|AA|G|548
Current chains
- Chain AA
- Ribosomal RNA 16S
Nearby chains
- Chain AD
- 30S ribosomal protein S4
- Chain AL
- 30S ribosomal protein S12
Coloring options: