J5_7OIC_003
3D structure
- PDB id
- 7OIC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGAAGACC*GGAUAACA*UCGAUGUU*AGUUCAG*CGGUUU
- Length
- 37 nucleotides
- Bulged bases
- 7OIC|1|A|A|1055, 7OIC|1|A|A|1265, 7OIC|1|A|U|1402, 7OIC|1|A|U|1426, 7OIC|1|A|U|1427
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OIC|1|A|A|1050
7OIC|1|A|G|1051
7OIC|1|A|A|1052
7OIC|1|A|A|1053
7OIC|1|A|G|1054
7OIC|1|A|A|1055
7OIC|1|A|C|1056
7OIC|1|A|C|1057
*
7OIC|1|A|G|1263
7OIC|1|A|G|1264
7OIC|1|A|A|1265
7OIC|1|A|U|1266
7OIC|1|A|A|1267
7OIC|1|A|A|1268
7OIC|1|A|C|1269
7OIC|1|A|A|1270
*
7OIC|1|A|U|1317
7OIC|1|A|C|1318
7OIC|1|A|G|1319
7OIC|1|A|A|1320
7OIC|1|A|U|1321
7OIC|1|A|G|1322
7OIC|1|A|U|1323
7OIC|1|A|U|1324
*
7OIC|1|A|A|1399
7OIC|1|A|G|1400
7OIC|1|A|U|1401
7OIC|1|A|U|1402
7OIC|1|A|C|1403
7OIC|1|A|A|1404
7OIC|1|A|G|1405
*
7OIC|1|A|C|1423
7OIC|1|A|G|1424
7OIC|1|A|G|1425
7OIC|1|A|U|1426
7OIC|1|A|U|1427
7OIC|1|A|U|1428
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
Coloring options: