J5_7OOD_005
3D structure
- PDB id
- 7OOD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAA*UGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 7OOD|1|3|A|2069, 7OOD|1|3|A|2456, 7OOD|1|3|U|2617
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OOD|1|3|G|2064
7OOD|1|3|A|2065
7OOD|1|3|A|2066
7OOD|1|3|A|2067
7OOD|1|3|G|2068
7OOD|1|3|A|2069
7OOD|1|3|C|2070
7OOD|1|3|C|2071
*
7OOD|1|3|G|2454
7OOD|1|3|G|2455
7OOD|1|3|A|2456
7OOD|1|3|U|2457
7OOD|1|3|A|2458
7OOD|1|3|A|2459
7OOD|1|3|C|2460
7OOD|1|3|A|2461
*
7OOD|1|3|U|2508
7OOD|1|3|C|2509
7OOD|1|3|G|2510
7OOD|1|3|A|2511
7OOD|1|3|U|2512
7OOD|1|3|G|2513
7OOD|1|3|U|2514
7OOD|1|3|C|2515
*
7OOD|1|3|G|2590
7OOD|1|3|G|2591
7OOD|1|3|U|2592
7OOD|1|3|U|2593
7OOD|1|3|C|2594
7OOD|1|3|A|2595
7OOD|1|3|A|2596
*
7OOD|1|3|U|2614
7OOD|1|3|G|2615
7OOD|1|3|G|2616
7OOD|1|3|U|2617
7OOD|1|3|C|2618
7OOD|1|3|C|2619
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain a
- 50S ribosomal protein L2
- Chain b
- 50S ribosomal protein L3
- Chain c
- 50S ribosomal protein L4
- Chain k
- 50S ribosomal protein L15
- Chain l
- 50S ribosomal protein L16
- Chain r
- 50S ribosomal protein L22
- Chain u
- 50S ribosomal protein L27
- Chain y
- 50S ribosomal protein L32
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