J5_7OSA_001

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUGAG*CGAGGAACAAU*AUAG

Length

35 nucleotides

Bulged bases

7OSA|1|18S|A|541, 7OSA|1|18S|A|544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSA|1|18S|C|31
7OSA|1|18S|U|32
7OSA|1|18S|U|33
7OSA|1|18S|G|34
7OSA|1|18S|U|35
*
7OSA|1|18S|A|473
7OSA|1|18S|A|474
7OSA|1|18S|A|475
7OSA|1|18S|U|476
7OSA|1|18S|A|477
7OSA|1|18S|A|478
7OSA|1|18S|C|479
*
7OSA|1|18S|G|509
7OSA|1|18S|G|510
7OSA|1|18S|A|511
7OSA|1|18S|A|512
7OSA|1|18S|U|513
7OSA|1|18S|G|514
7OSA|1|18S|A|515
7OSA|1|18S|G|516
*
7OSA|1|18S|C|536
7OSA|1|18S|G|537
7OSA|1|18S|A|538
7OSA|1|18S|G|539
7OSA|1|18S|G|540
7OSA|1|18S|A|541
7OSA|1|18S|A|542
7OSA|1|18S|C|543
7OSA|1|18S|A|544
7OSA|1|18S|A|545
7OSA|1|18S|U|546
*
7OSA|1|18S|A|592
7OSA|1|18S|U|593
7OSA|1|18S|A|594
7OSA|1|18S|G|595

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS30

40S ribosomal protein S30

Chain uS12

40S ribosomal protein S23

Chain uS4

BJ4_G0026100.mRNA.1.CDS.1