J5_7P7R_002

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCAAAC*GGGUUGUA*UGAGUAC*GGAAUCCG*CAAG

Length

33 nucleotides

Bulged bases

7P7R|1|A|U|300, 7P7R|1|A|C|444

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7P7R|1|A|C|270
7P7R|1|A|C|271
7P7R|1|A|A|272
7P7R|1|A|A|273
7P7R|1|A|A|274
7P7R|1|A|C|275
*
7P7R|1|A|G|294
7P7R|1|A|G|295
7P7R|1|A|G|296
7P7R|1|A|U|297
7P7R|1|A|U|298
7P7R|1|A|G|299
7P7R|1|A|U|300
7P7R|1|A|A|301
*
7P7R|1|A|U|408
7P7R|1|A|G|409
7P7R|1|A|A|410
7P7R|1|A|G|411
7P7R|1|A|U|412
7P7R|1|A|A|413
7P7R|1|A|C|414
*
7P7R|1|A|G|438
7P7R|1|A|G|439
7P7R|1|A|A|440
7P7R|1|A|A|441
7P7R|1|A|U|442
7P7R|1|A|C|443
7P7R|1|A|C|444
7P7R|1|A|G|445
*
7P7R|1|A|C|460
7P7R|1|A|A|461
7P7R|1|A|A|462
7P7R|1|A|G|463

Current chains

Chain A

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L28