J5_7P7U_008

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGG*CGUG*CUGUUG*CCAGAAAG*CAAG

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7P7U|1|a|C|38
7P7U|1|a|U|39
7P7U|1|a|G|40
7P7U|1|a|G|41
*
7P7U|1|a|C|429
7P7U|1|a|G|430
7P7U|1|a|U|431
7P7U|1|a|G|432
*
7P7U|1|a|C|462
7P7U|1|a|U|463
7P7U|1|a|G|464
7P7U|1|a|U|465
7P7U|1|a|U|466
7P7U|1|a|G|467
*
7P7U|1|a|C|519
7P7U|1|a|C|520
7P7U|1|a|A|521
7P7U|1|a|G|522
7P7U|1|a|A|523
7P7U|1|a|A|524
7P7U|1|a|A|525
7P7U|1|a|G|526
*
7P7U|1|a|C|571
7P7U|1|a|A|572
7P7U|1|a|A|573
7P7U|1|a|G|574

Current chains

Chain a

16S rRNA

Nearby chains

Chain e

30S ribosomal protein S4

Chain m

30S ribosomal protein S12