J5_7PIA_002
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- GUG*CGUGC*GAGCC*GGCAUGAGUAA*UGAAAUCC
- Length
- 32 nucleotides
- Bulged bases
- 7PIA|1|3|U|567, 7PIA|1|3|U|595
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PIA|1|3|G|566
7PIA|1|3|U|567
7PIA|1|3|G|568
*
7PIA|1|3|C|593
7PIA|1|3|G|594
7PIA|1|3|U|595
7PIA|1|3|G|596
7PIA|1|3|C|597
*
7PIA|1|3|G|610
7PIA|1|3|A|611
7PIA|1|3|G|612
7PIA|1|3|C|613
7PIA|1|3|C|614
*
7PIA|1|3|G|1289
7PIA|1|3|G|1290
7PIA|1|3|C|1291
7PIA|1|3|A|1292
7PIA|1|3|U|1293
7PIA|1|3|G|1294
7PIA|1|3|A|1295
7PIA|1|3|G|1296
7PIA|1|3|U|1297
7PIA|1|3|A|1298
7PIA|1|3|A|1299
*
7PIA|1|3|U|2018
7PIA|1|3|G|2019
7PIA|1|3|A|2020
7PIA|1|3|A|2021
7PIA|1|3|A|2022
7PIA|1|3|U|2023
7PIA|1|3|C|2024
7PIA|1|3|C|2025
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain c
- 50S ribosomal protein L4
- Chain i
- 50S ribosomal protein L13
- Chain m
- 50S ribosomal protein L17
- Chain p
- 50S ribosomal protein L20
- Chain q
- 50S ribosomal protein L21
- Chain r
- 50S ribosomal protein L22
- Chain y
- 50S ribosomal protein L32
Coloring options: